SNP Report

Basic Info

Name	rs2339816 dbSNP Ensembl
Location	chr12:111474384 - 111474384(1)
Variant Alleles	T/C
Ancestral Allele	T
Minor Allele	C
Minor Allele Frequence	0.230431
Functional Annotation	intron_variant; NMD_transcript_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	intron_variant(ENST00000377617, ENST00000389153, ENST00000389154, ENST00000483311, ENST00000495342, ENST00000535949, ENST00000542287, ENST00000550104, ENST00000551755, ENST00000608853, ENST00000616825); NMD_transcript_variant(ENST00000483311, ENST00000551755); non_coding_transcript_variant(ENST00000495342); upstream_gene_variant(ENST00000482777, ENST00000550844, ENST00000550889)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
ATXN2	ataxin 2	12q23-q24.1	Mapped by LD-proxy

SNPs in LD with rs2339816 (count: 0) View in gBrowse (chr12:111474384..111474384 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)