SNP Report

Basic Info

Name	rs2293160 dbSNP Ensembl
Location	chr3:196295879 - 196295879(1)
Variant Alleles	T/C
Ancestral Allele	T
Minor Allele	C
Minor Allele Frequence	0.426917
Functional Annotation	downstream_gene_variant; intron_variant; NMD_transcript_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000441819); intron_variant(ENST00000325318, ENST00000426563, ENST00000431391, ENST00000446494, ENST00000465757); NMD_transcript_variant(ENST00000426563, ENST00000431391, ENST00000446494); non_coding_transcript_variant(ENST00000465757); upstream_gene_variant(ENST00000491186)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
TCTEX1D2	Tctex1 domain containing 2	3q29	1(0/1/0)

SNPs in LD with rs2293160 (count: 0) View in gBrowse (chr3:196295879..196295879 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)