SNP Report

Basic Info

Name	rs2289629 dbSNP Ensembl
Location	chr17:29632885 - 29632885(1)
Variant Alleles	G/A
Ancestral Allele	G
Minor Allele	A
Minor Allele Frequence	0.184704
Functional Annotation	intron_variant; missense_variant; non_coding_transcript_variant; upstream_gene_variant. Polyphen Annotation: benign(ENST00000269033, ENST00000540801) SIFT Annotation: deleterious - low confidence(ENST00000269033, ENST00000540801)
Consequence to Transcript	intron_variant(ENST00000581474); missense_variant(ENST00000269033, ENST00000540801); non_coding_transcript_variant(ENST00000581474); upstream_gene_variant(ENST00000577991)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
SSH2	slingshot protein phosphatase 2	17q11.2	Mapped by Literature SNP

SNPs in LD with rs2289629 (count: 0) View in gBrowse (chr17:29632885..29632885 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)