BDgene

SNP Report

Basic Info
Name rs2283454 dbSNP Ensembl
Location chr15:92157044 - 92157044(1)
Variant Alleles G/T
Ancestral Allele T
Minor Allele G
Minor Allele Frequence 0.28754
Functional Annotation downstream_gene_variant; intron_variant; NMD_transcript_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000555769); intron_variant(ENST00000318445, ENST00000424469, ENST00000555210, ENST00000555513, ENST00000555549, ENST00000555892, ENST00000561674); NMD_transcript_variant(ENST00000555210, ENST00000555892); non_coding_transcript_variant(ENST00000555513, ENST00000555549, ENST00000561674); upstream_gene_variant(ENST00000564072)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
SLCO3A1 solute carrier organic anion transporter family, member 3A1 15q26 2(1/1/0)

SNPs in LD with rs2283454 (count: 0) View in gBrowse (chr15:92157044..92157044 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)