SNP Report

Basic Info

Name	rs2271308 dbSNP Ensembl
Location	chr17:39661229 - 39661229(1)
Variant Alleles	T/C
Ancestral Allele	C
Minor Allele	T
Minor Allele Frequence	0.451078
Functional Annotation	downstream_gene_variant; intron_variant; NMD_transcript_variant; non_coding_transcript_exon_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000443521, ENST00000460894, ENST00000484773, ENST00000577248, ENST00000578232, ENST00000578254, ENST00000579479, ENST00000580331, ENST00000580551, ENST00000581894, ENST00000582874, ENST00000583419, ENST00000583582, ENST00000583718, ENST00000585214); intron_variant(ENST00000336308, ENST00000394250, ENST00000471896, ENST00000481171, ENST00000488876, ENST00000544210, ENST00000578384, ENST00000578577, ENST00000580611, ENST00000583639, ENST00000583884, ENST00000584850, ENST00000585269); NMD_transcript_variant(ENST00000578577, ENST00000583884); non_coding_transcript_exon_variant(ENST00000578686); non_coding_transcript_variant(ENST00000471896, ENST00000481171, ENST00000488876, ENST00000578384, ENST00000578686, ENST00000583639, ENST00000584850, ENST00000585269); upstream_gene_variant(ENST00000309889, ENST00000578283, LRG_210t1)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
STARD3	StAR-related lipid transfer (START) domain containing 3	17q11-q12	Mapped by Literature SNP
TCAP	titin-cap	17q12	Mapped by LD-proxy

SNPs in LD with rs2271308 (count: 0) View in gBrowse (chr17:39661229..39661229 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)