BDgene

SNP Report

Basic Info
Name rs2271074 dbSNP Ensembl
Location chr1:31261994 - 31261994(1)
Variant Alleles C/T
Ancestral Allele C
Minor Allele T
Minor Allele Frequence 0.411542
Functional Annotation downstream_gene_variant; intron_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000452686); intron_variant(ENST00000263694, ENST00000373720, ENST00000489853); non_coding_transcript_variant(ENST00000489853); upstream_gene_variant(ENST00000486941, ENST00000491106)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
SNRNP40 small nuclear ribonucleoprotein 40kDa (U5) 1p35.2 Mapped by LD-proxy

SNPs in LD with rs2271074 (count: 0) View in gBrowse (chr1:31261994..31261994 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)