BDgene

SNP Report

Basic Info
Name rs2061052 dbSNP Ensembl
Location chr8:98040797 - 98040797(1)
Variant Alleles T/C
Ancestral Allele T
Minor Allele C
Minor Allele Frequence 0.126597
Functional Annotation downstream_gene_variant; intron_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000254898, ENST00000287038, ENST00000384339, ENST00000396070, ENST00000517489, ENST00000517805, ENST00000518154, ENST00000518850, ENST00000520016, ENST00000520998, ENST00000521112, ENST00000521291, ENST00000521534, ENST00000521689, ENST00000521726, ENST00000522025, ENST00000522156, ENST00000523172, ENST00000523561, ENST00000524308); intron_variant(ENST00000518164); non_coding_transcript_variant(ENST00000518164); upstream_gene_variant(ENST00000501016)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 3)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
RPL30 ribosomal protein L30 8q22 Mapped by Literature SNP
SNORA72 small nucleolar RNA, H/ACA box 72 8q22.2 Mapped by LD-proxy
MATN2 matrilin 2 8q22.1-q22.2 Mapped by Literature SNP

SNPs in LD with rs2061052 (count: 0) View in gBrowse (chr8:98040797..98040797 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)