SNP Report

Basic Info

Name	rs17653162 dbSNP Ensembl
Location	chrCHR_HSCHR17_2_CTG5:46046070 - 46046070(1)
Variant Alleles	C/A
Ancestral Allele	C
Minor Allele	A
Minor Allele Frequence	0.086262
Functional Annotation	downstream_gene_variant; intron_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000572679, ENST00000573286); intron_variant(ENST00000262419, ENST00000432791, ENST00000572218, ENST00000572904, ENST00000574590, ENST00000575318, ENST00000576137, ENST00000576870); non_coding_transcript_variant(ENST00000572218, ENST00000576137, ENST00000576870); upstream_gene_variant(ENST00000570454, ENST00000573682, ENST00000574963, ENST00000627974, ENST00000629430, ENST00000611596, ENST00000626533, ENST00000626891, ENST00000627698, ENST00000628965, ENST00000629551, ENST00000630200, ENST00000631355, ENST00000626891, ENST00000628965, ENST00000631355, ENST00000625290, ENST00000629700, ENST00000630719, ENST00000633388, ENST00000634063, ENST00000610328, ENST00000613150, ENST00000622036, ENST00000632323, ENST00000632594, ENST00000633346, ENST00000633505, ENST00000633819, ENST00000632323, ENST00000632594, ENST00000633505, ENST00000631434, ENST00000632100, ENST00000632682)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
KANSL1	KAT8 regulatory NSL complex subunit 1	17q21.31	Mapped by Literature SNP

SNPs in LD with rs17653162 (count: 0) View in gBrowse (chrCHR_HSCHR17_2_CTG5:46046070..46046070 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)