BDgene

SNP Report

Basic Info
Name rs16996127 dbSNP Ensembl
Location chr19:19516501 - 19516501(1)
Variant Alleles T/G
Ancestral Allele G
Minor Allele G
Minor Allele Frequence 0.204273
Functional Annotation intron_variant; NMD_transcript_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript intron_variant(ENST00000428459, ENST00000502506, ENST00000503283, ENST00000507754, ENST00000511180, ENST00000511584, ENST00000555938, ENST00000586674, ENST00000606722); NMD_transcript_variant(ENST00000502506, ENST00000606722); non_coding_transcript_variant(ENST00000511180, ENST00000511584, ENST00000586674); upstream_gene_variant(ENST00000585580, ENST00000587522, ENST00000602623)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
NDUFA13 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13 19p13.11 Mapped by LD-proxy
TSSK6 testis-specific serine kinase 6 19p13.11 Mapped by LD-proxy

SNPs in LD with rs16996127 (count: 0) View in gBrowse (chr19:19516501..19516501 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)