SNP Report

Basic Info

Name	rs1565922 dbSNP Ensembl
Location	chr17:39674782 - 39674782(1)
Variant Alleles	A/G
Ancestral Allele	A
Minor Allele	A
Minor Allele Frequence	0.444489
Functional Annotation	downstream_gene_variant; intron_variant; NMD_transcript_variant; non_coding_transcript_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000269582, ENST00000394246, ENST00000581428); intron_variant(ENST00000300658, ENST00000309862, ENST00000378011, ENST00000429199, ENST00000577337, ENST00000579146, ENST00000580898, ENST00000582276, ENST00000584620, ENST00000619169); NMD_transcript_variant(ENST00000577337, ENST00000584620); non_coding_transcript_variant(ENST00000309862, ENST00000580898, ENST00000582276)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
PNMT	phenylethanolamine N-methyltransferase	17q12	Mapped by LD-proxy
PGAP3	post-GPI attachment to proteins 3	17q21.2	Mapped by LD-proxy

SNPs in LD with rs1565922 (count: 0) View in gBrowse (chr17:39674782..39674782 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)