BDgene

SNP Report

Basic Info
Name rs1535 dbSNP Ensembl
Location chr11:61830500 - 61830500(1)
Variant Alleles A/G
Ancestral Allele G
Minor Allele G
Minor Allele Frequence 0.321885
Functional Annotation downstream_gene_variant; intron_variant; upstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000517839, ENST00000522639, ENST00000574708); intron_variant(ENST00000257261, ENST00000278840, ENST00000517312, ENST00000518606, ENST00000521849, ENST00000522056); upstream_gene_variant(ENST00000421879, ENST00000448607)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
FADS2 fatty acid desaturase 2 11q12.2 Mapped by Literature SNP
FADS1 fatty acid desaturase 1 11q12-q13.1 Mapped by LD-proxy

SNPs in LD with rs1535 (count: 0) View in gBrowse (chr11:61830500..61830500 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)