SNP Report

Basic Info

Name	rs1331503 dbSNP Ensembl
Location	chr9:90640235 - 90640235(1)
Variant Alleles	A/T
Ancestral Allele	T
Minor Allele	A
Minor Allele Frequence	0.441693
Functional Annotation	intron_variant.
Consequence to Transcript	intron_variant(ENST00000375765, ENST00000636786, ENST00000637905)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Reif, A.,2011	T/A	A	X² test: P-value = 0.1923, OR=1.16, 95%CI=0.93-1....... X² test: P-value = 0.1923, OR=1.16, 95%CI=0.93-1.44 More...	No significant association was observed. No significant association was observed.	Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
DIRAS2	DIRAS family, GTP-binding RAS-like 2	9q22.32	1(1/0/0)

SNPs in LD with rs1331503 (count: 2) View in gBrowse (chr9:90640124..90647628 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²<=0.8.

rs_ID	Literature-origin SNPs with LD	Functional Annotation	r²[population]
rs1331502		intron_variant	0.96[CEU]
rs1017754		upstream_gene_variant	0.918[CEU]

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)