BDgene

SNP Report

Basic Info
Name rs13081028 dbSNP Ensembl
Location chr3:52521300 - 52521300(1)
Variant Alleles G/A
Ancestral Allele A
Minor Allele G
Minor Allele Frequence 0.454473
Functional Annotation downstream_gene_variant; intron_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000307076, ENST00000422318, ENST00000459839, ENST00000461325, ENST00000462261, ENST00000463947, ENST00000466112, ENST00000469616, ENST00000478091, ENST00000479024, ENST00000492555); intron_variant(ENST00000321725, ENST00000481626); non_coding_transcript_variant(ENST00000481626); upstream_gene_variant(ENST00000462681, ENST00000462741, ENST00000469989)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
STAB1 stabilin 1 3p21.31 Mapped by Literature SNP
NT5DC2 5'-nucleotidase domain containing 2 3p21.1 Mapped by LD-proxy

SNPs in LD with rs13081028 (count: 0) View in gBrowse (chr3:52521300..52521300 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)