SNP Report

Basic Info

Name	rs12292490 dbSNP Ensembl
Location	chr11:18001145 - 18001145(1)
Variant Alleles	G/T
Ancestral Allele	G
Minor Allele	T
Minor Allele Frequence	0.300919
Functional Annotation	intron_variant; NMD_transcript_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	intron_variant(ENST00000265965, ENST00000524716, ENST00000525422, ENST00000525523, ENST00000525920, ENST00000527494, ENST00000528200, ENST00000529728, ENST00000530613, ENST00000530925, ENST00000532212, ENST00000532265, ENST00000532389, ENST00000533328); NMD_transcript_variant(ENST00000524716, ENST00000525422, ENST00000527494, ENST00000530925, ENST00000533328); non_coding_transcript_variant(ENST00000525523, ENST00000532212); upstream_gene_variant(ENST00000529151)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
SERGEF	secretion regulating guanine nucleotide exchange factor	11p14.3	Mapped by LD-proxy

SNPs in LD with rs12292490 (count: 0) View in gBrowse (chr11:18001145..18001145 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)