SNP Report

Basic Info
Name rs11951528 dbSNP Ensembl
Location chr5:161790470 - 161790470(1)
Variant Alleles G/A
Ancestral Allele A
Minor Allele A
Minor Allele Frequence 0.394768
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Yosifova, A.,2011 GWAS P-value = 0.0000199, OR(95%CI)=2.14(1.48-3.10); Replica...... GWAS P-value = 0.0000199, OR(95%CI)=2.14(1.48-3.10); Replication P-value = 0.527, OR(95%CI)=1.24(0.65-2.39); Mantel-Haenszel P-value = 0.00283, OR(95%CI)=1.5(1.13-1.98) More... No significant association was observed in BD. No significant association was observed in BD. Negative

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
GABRA1 gamma-aminobutyric acid (GABA) A receptor, alpha 1 5q34 2(1/1/0)

SNPs in LD with rs11951528 (count: 9) View in gBrowse (chr5:161755610..161812447 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 9)

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)