BDgene

SNP Report

Basic Info
Name rs11946541 dbSNP Ensembl
Location chr4:38749059 - 38749059(1)
Variant Alleles G/A
Minor Allele A
Minor Allele Frequence 0.246605
No. of Studies 1 (Positive: 1; Negative: 0; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Kuo, P. H., 2014 P-value=0.00971, OR=0.7, 95%CI=0.5-0.9 for the second stage P-value=0.00971, OR=0.7, 95%CI=0.5-0.9 for the second stage The marker is identified to be associated with bipolar disor...... The marker is identified to be associated with bipolar disorder in the fine-mapping stage with P-value less than 0.05. More... Positive

SNP related genes (count: 0)

SNPs in LD with rs11946541 (count: 1) View in gBrowse (chr4:38745269..38749059 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 1)


Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback Acknowledgements
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Last update: March 31, 2016