SNP Report

Basic Info

Name	rs11542510 dbSNP Ensembl
Location	chr12:51064071 - 51064071(1)
Variant Alleles	G/A
Ancestral Allele	G
Minor Allele	A
Minor Allele Frequence	0.0485224
Functional Annotation	downstream_gene_variant; missense_variant. Polyphen Annotation: benign(ENST00000228515) SIFT Annotation: tolerated - low confidence(ENST00000228515)
Consequence to Transcript	downstream_gene_variant(ENST00000262055, ENST00000380135, ENST00000418425, ENST00000546814, ENST00000547008, ENST00000547256, ENST00000547318, ENST00000547555, ENST00000547660, ENST00000547877, ENST00000548206, ENST00000548516, ENST00000549395, ENST00000549686, ENST00000550100, ENST00000550274, ENST00000550929, ENST00000551931, ENST00000552645, ENST00000552739, ENST00000553043, ENST00000623495); missense_variant(ENST00000228515)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Strauss, K. A., 2014	G/A		Bipolar 1 disorder: X²=0.2, FBAT P-value=0.824, E...... Bipolar 1 disorder: X²=0.2, FBAT P-value=0.824, EMMAX P-value=0.939; Bipolar spectrum disorder: X⁸=0.1, FBAT P-value=0.654, EMMAX P-value=0.606 More...	No significant associations were observed. No significant associations were observed.	Negative

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
CSRNP2	cysteine-serine-rich nuclear protein 2	12q13.11-q13.12	1(0/1/0)
LETMD1	LETM1 domain containing 1	12q13.13	Mapped by Literature SNP

SNPs in LD with rs11542510 (count: 0) View in gBrowse (chr12:51064071..51064071 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)