SNP Report

Basic Info

Name	rs11130219 dbSNP Ensembl
Location	chr3:49714994 - 49714994(1)
Variant Alleles	C/T
Ancestral Allele	C
Minor Allele	C
Minor Allele Frequence	0.415136
Functional Annotation	downstream_gene_variant; intron_variant; NMD_transcript_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000308375, ENST00000320431, ENST00000432042, ENST00000480687); intron_variant(ENST00000327697, ENST00000433785, ENST00000444689, ENST00000457726, ENST00000469978, ENST00000486102, ENST00000487805); NMD_transcript_variant(ENST00000444689, ENST00000457726); non_coding_transcript_variant(ENST00000469978, ENST00000486102, ENST00000487805); upstream_gene_variant(ENST00000497099)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 3)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
AMIGO3	adhesion molecule with Ig-like domain 3	3p21	Mapped by LD-proxy
RNF123	ring finger protein 123	3p24.3	Mapped by LD-proxy
GMPPB	GDP-mannose pyrophosphorylase B	3p21.31	Mapped by LD-proxy

SNPs in LD with rs11130219 (count: 0) View in gBrowse (chr3:49714994..49714994 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)