BDgene

SNP Report

Basic Info
Name rs1049256 dbSNP Ensembl
Location chr3:49725905 - 49725905(1)
Variant Alleles T/C
Ancestral Allele C
Minor Allele T
Minor Allele Frequence 0.401558
Functional Annotation 3_prime_UTR_variant; downstream_gene_variant; upstream_gene_variant.
Consequence to Transcript 3_prime_UTR_variant(ENST00000321599, ENST00000395238, ENST00000613416); downstream_gene_variant(ENST00000327697, ENST00000433785, ENST00000457726, ENST00000460540, ENST00000468463, ENST00000486102, ENST00000487805, ENST00000495798, ENST00000498376); upstream_gene_variant(ENST00000308375, ENST00000308388, ENST00000480687, ENST00000481959, ENST00000495627)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 3)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
RNF123 ring finger protein 123 3p24.3 Mapped by LD-proxy
GMPPB GDP-mannose pyrophosphorylase B 3p21.31 Mapped by LD-proxy
IP6K1 inositol hexakisphosphate kinase 1 3p21.31 Mapped by LD-proxy

SNPs in LD with rs1049256 (count: 0) View in gBrowse (chr3:49725905..49725905 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)