BDgene

SNP Report

Basic Info
Name rs1004467 dbSNP Ensembl
Location chr10:102834750 - 102834750(1)
Variant Alleles A/G
Ancestral Allele A
Minor Allele G
Minor Allele Frequence 0.21905
Functional Annotation downstream_gene_variant; intron_variant; non_coding_transcript_exon_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000369884, ENST00000445829); intron_variant(ENST00000369887); non_coding_transcript_exon_variant(ENST00000489268); non_coding_transcript_variant(ENST00000489268); upstream_gene_variant(ENST00000469683)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 3)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
PFN1P11 profilin 1 pseudogene 11 10q24.32 Mapped by LD-proxy
CYP17A1 cytochrome P450, family 17, subfamily A, polypeptide 1 10q24.3 Mapped by LD-proxy
CYP17A1-AS1 CYP17A1 antisense RNA 1 10q24.32 Mapped by LD-proxy

SNPs in LD with rs1004467 (count: 0) View in gBrowse (chr10:102834750..102834750 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)