Gene Report

Basic Info
Approved Symbol NT5DC1
Previous Symbol NT5C2L1
Symbol Alias dJ486I3.1, MGC24302
Approved Name 5'-nucleotidase domain containing 1
Previous Name 5'-nucleotidase, cytosolic II-like 1
Location 6q22.31
Position chr6:116100849-116249497, 1
External Links HGNC: 21556
Entrez Gene: 221294
Ensembl: ENSG00000178425
UCSC: uc003pwj.3
No. of Studies 1 (Positive: 1; Negative: 0; trend: 0)
Overlap with SZ? NO
Overlap with MDD? NO
Gene related studies (count: 1)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Fan, J., 2010 SNP: rs1204787, rs4946138 For gene-based test, P-value = 0.29 in STEP1; P-value = 0.02 in NIMH; P-value = 0.05 in STEP1 and NIMH. nominally significant in NIMH sample and pooled sample, but not survive Bonferroni correction test. Positive Comment on Study
Gene functional annotation
Gene related GO terms (count: 3)

GO terms by PBA (count: 0)

GO terms by database search (count: 3)

Gene related KEGG pathways (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 0)

Related other genetic factors
Gene related SNPs (count: 35)

Literature-origin SNPs (count: 2)

LD-proxies (count: 33)

Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 5)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Gene relationship with MDD

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Region: chr6:116100849..116249497 View in gBrowse
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