BDgene

Gene Report

Basic Info
Approved Symbol LGI2
Symbol Alias KIAA1916, FLJ10675
Approved Name leucine-rich repeat LGI family, member 2
Location 4p15.31
Position chr4:24998847-25030879, -1
External Links HGNC: 18710
Entrez Gene: 55203
Ensembl: ENSG00000153012
UCSC: uc003grf.2
No. of Studies 1 (Positive: 1; Negative: 0; trend: 0)
Overlap with SZ? NO
Overlap with MDD? NO
Gene related studies (count: 1)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Johnson, C.,2009 Monte-Carlo Simulation P-value = 0.0019. One of Genes That Harbor Overlapping Clusters of 4 Nominally Positive SNPs Whose Allele Frequencies Distinguish Individuals With Bipolar Disorder From Controls With P<0.05 Nominal Significance From at Least Three of the Four Samples in This Analysis Positive Comment on Study
Gene functional annotation
Gene related GO terms (count: 1)

GO terms by PBA (count: 0)

GO terms by database search (count: 1)


Gene related KEGG pathways (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 0)

Related other genetic factors
Gene related SNPs (count: 0)

Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 3)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Gene relationship with MDD

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Region: chr4:24998847..25030879 View in gBrowse
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