Gene Report

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Basic Info

Approved Symbol	GAPDHP57
Approved Name	glyceraldehyde 3 phosphate dehydrogenase pseudogene 57
Location	2p12
Position	chr2:75455994-75456578, -1
External Links	HGNC: 38563 Entrez Gene: 100421188 Ensembl: ENSG00000236167
No. of Studies	1 (Positive: 1; Negative: 0; trend: 0)
Overlap with SZ?	NO
Overlap with MDD?	NO

Gene related studies (count: 1)

Reference	Tested Markers	Statistical Values/Author Comments	Result Category	Comment on Study
Sharp S.I., 2014	SNP: rs72814734, rs77637660	Significant association of SNP in this gene with BD was observed.	Positive	Comment on Study

Gene functional annotation

Gene related GO terms (count: 0)

Gene related KEGG pathways (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 0)

Related other genetic factors

Gene related SNPs (count: 2)

rs_ID	Location	Functional Annotation	No. of Studies (Positive/Negative/Trend)
rs72814734	chr2:75456182 - 75456182(1)	non_coding_transcript_exon_variant; non_coding_transcript_variant	1(1/0/0)
rs77637660	chr2:75461553 - 75461553(1)	upstream_gene_variant	1(1/0/0)

Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 4)

Region Name	Position	No. of Studies (Positive/Negative/Trend)
2p16.1-q11.2	chr2:54700000-102100000	1 (1/0/0)
2p16.2-p11.2	chr2:52600000-91800000	1 (1/0/0)
2p12	chr2:74800000-83100000	1 (0/0/1)
Chr 2	chr2:0-242193529	3 (0/3/0)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)

Gene relationship with SZ

Gene relationship with MDD

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Region: chr2:75455994..75456578 View in gBrowse