BDgene

Core Gene from Gene Prioritization Pathways from PBA (Pathway-based Analysis) Enriched Pathways for Core Genes Enriched Pathways for Cross-disorder Genes

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Other Variant Report

Basic Info

Name	SYNJ1 intron12 IVS12+15delT,+17delT
Type	insertion/deletion
Location	intron12
Related Gene	SYNJ1
No. of Study	1 (Positive: 0; Negative 1; Trend: 0)
Overlap with SZ?	NO
Overlap with MDD?	NO

Variant related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Stopkova, P., 2004 (b)			Czech samples: allele frequency X²=0.16, P-value = 0.69, genotypes X²=1.06, P-value = 0.59. Combinedsamples: allele frequency X²=2.05, P-value = 0.15, genotypes X²=1.06, P-value = 0.29, 2*2 homozygotes vs. all other genotypes X²=2.27, P-value = 0.13	Although there was an increase in 22 homozygotes in the bip..... More Although there was an increase in 22 homozygotes in the bipolar Czech subjects, similar to our previous study, the results were not statistically significant. When the data from both studies were combined, a trend towards significance was still found for 2*2 homozygotes Less	Negative

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)