Study Report

Basic Info
| Reference |
Zhang X, 2013 PMID: 23680436
|
| Citation |
Zhang, X., C. Zhang, et al. (2013). "Association of genetic variation in CACNA1C with bipolar disorder in Han Chinese." J Affect Disord.
|
| Disease Type |
bipolar disorder & MDD |
| Study Design |
case-control |
| Study Type |
Candidate-gene association study |
| Sample Size |
635 MDD patients, 286 BD patients and 730 controls |
| SNP/Region/Marker Size |
3 SNPs |
| Predominant Ethnicity |
Mongloid |
| Population |
Chinese |
| Gender |
241 male MDD patients, 116 male BD patients, 288 male controls |
| Age Group |
adults
:
mean age=37.9 (SD=12.5) years of MDD patients, mean age=32.7 (SD=11.4) years of BD patients, mean age=34.5 (SD=6.8) years of controls
|

Detail Info
| Sample Diagnosis |
DSM-IV |
| Sample Status |
The MDD patients used in this study were comprised of both inpatients and outpatients from our multicenter, longitudinal 'OPERATION' study, 'OPERATION-ECMA' study,and 'CARE-SSD/ MDD' study,conducted between January 2005 and October 2010. The patients who met DSM-IV criteria for BD type1 or type 2 were recruited from the Division of Mood Disorders at Shanghai Mental Health Center, Shanghai JiaoTong University School of Medicine between November 2006 and October 2010. |
| Technique |
genotyping using the TaqMan SNP Genotyping Assay |
| Statistical Method |
The differences in distribution of allele frequencies between cases and controls were calculated on SHEsis. Deviation from Hardy-Weinberg equilibrium, as well as pair-wise linkage disequilibrium(LD) for all pairs of SNPs and haplotype analysis were performed by using Haploview4.1. All calculations were performed using SPSS17.0. Power analysis was performed using Quanto 1.2.3. For multiple test correction, the Bonferroni p-value cut-off was set at 0.0125. |
| Result Summary |
The genotype frequencies of SNP rs1051375 showed statistically significant differences between the BD and control groups (P=0.005). At the allele level, the difference of G allele frequency of rs1051375 between BD patients and control subjects was also significant (P=0.011; OR=1.30, 95% CI: 1.06-1.58). We found that GG genotype of rs1051375 carriers had a lower age at onset than those with the AG or AA genotype, and the mean+/-standard deviation ages at onset of GG, AG and AA carriers were 24.04+/-4.22, 25.76+/-4.75 and 25.78+/-4.33 years, respectively. Neither genotype nor allele frequencies of the three polymorphisms were found to be significantly different between the MDD patients and control subjects. LIMITATIONS: The relative small sample size in BD group should be considered a limitation of this study. Our initial findings support a potential association of CACNA1C as a genetic risk factor for BD susceptibility. |

Genetic factors reported by this study for BD

SNPs reported by this study for BD (count: 3)
| SNP |
Related Gene(s) |
Allele Change |
Risk Allele |
Statistical Values |
Author Comments |
Result Category |
| rs723672 |
CACNA1C
CACNA1C-IT2
|
C/T |
|
genotypic P-value=0.30, X2=2.38, allelic P-value=0.14, OR(95%CI)=1.18(0.95-1.48)
|
No significant association was found.
No significant association was found.
|
Negative
|
| rs215976 |
CACNA1C
|
C/T |
|
genotypic P-value=0.44, X2=1.63, allelic P-value=0.80, OR(95%CI)=0.97(0.79-1.20)
|
No significant association was found.
No significant association was found.
|
Negative
|
| rs1051375 |
CACNA1C
CACNA1C-AS1
|
A/G |
|
genotypic P-value=0.005, X2=10.48, allelic P-value=0.011, OR(95%CI)=1.30(1.06-1.58)
|
Between the BD and control groups, the genotype frequencies ......
Between the BD and control groups, the genotype frequencies of SNP rs1051375 showed a statistically significant difference. At the allele level, the difference of G allele frequency of rs1051375 between BD patients and control subjects was also significant. The frequency of the G allele of rs1051375 was greater in BD patients (39.0%) than in control subjects(33.0%).
More...
|
Positive
|

Genes reported by this study for BD (count: 1)
| Gene |
Statistical Values/Author Comments |
Result Category |
| CACNA1C |
Our initial findings support a potential association of CACNA1C as a genetic risk factor for BD susc......
Our initial findings support a potential association of CACNA1C as a genetic risk factor for BD susceptibility.
More...
|
Positive
|

Genetic factors reported by this study for SZ and/or MDD