BDgene

Study Report

Basic Info
Reference
Citation Hodgkinson, C. A., D. Goldman, et al. (2007). "The FEZ1 gene shows no association to schizophrenia in Caucasian or African American populations." Neuropsychopharmacology 32(1): 190-196.
Disease Type Bipolar Disorder & Schizophrenia
Study Design case-control
Study Type Candidate-gene association study
Sample Size The Caucasian sample of 521 individuals was comprised of 212 healthy controls, 178 schizophrenics, 79 bipolar disorder patients, and 58 patients with schizoaffective disorder. The African American sample, totaling 323 individuals, contained 133 healthy controls, 162 diagnosed schizophrenics, and 28 with schizoaffective disorder.
SNP/Region/Marker Size 9 SNPs
Predominant Ethnicity Caucasian and African American
Population American

Detail Info

Genetic factors reported by this study for BD
SNPs reported by this study for BD (count: 9)

Haplotypes reported by this study for BD (count: 5)

Genes reported by this study for BD (count: 1)

Genetic factors reported by this study for SZ and/or MDD
SNPs reported by this study for SZ/MDD
Disease SNP Related Gene(s) Statistical Values Description Result Category
SZ rs559668 FEZ1 Allelic P-value = 0.732, genotypic P-value = 0.927 in Caucasians. Allelic P-value = 0.411, genotypic P-value = 0.369 in African Americans. No association to schizophrenia was found for any of the nine markers typed in these populations at the allelic or the genotypic level. Negative
SZ rs597570 FEZ1 Allelic P-value = 0.586, genotypic P-value = 0.696 in Caucasians. Allelic P-value = 0.858, genotypic P-value = 0.812 in African Americans. No association to schizophrenia was found for any of the nine markers typed in these populations at the allelic or the genotypic level. Negative
SZ rs2702009 FEZ1 Allelic P-value = 0.994, genotypic P-value = 0.900 in Caucasians. Allelic P-value = 0.962, genotypic P-value = 0.363 in African Americans. No association to schizophrenia was found for any of the nine markers typed in these populations at the allelic or the genotypic level. Negative
SZ rs2907228 FEZ1 Allelic P-value = 0.804, genotypic P-value = 0.259 in Caucasians. Allelic P-value = 0.848, genotypic P-value = 0.982 in African Americans. No association to schizophrenia was found for any of the nine markers typed in these populations at the allelic or the genotypic level. Negative
SZ rs1365410 FEZ1 Allelic P-value = 0.237 in Caucasians. Allelic P-value = 0.576, genotypic P-value = 0.531 in African Americans. No association to schizophrenia was found for any of the nine markers typed in these populations at the allelic or the genotypic level. Negative
SZ rs2241514 FEZ1 Allelic P-value = 0.510, genotypic P-value = 0.788 in Caucasians. Allelic P-value = 0.911, genotypic P-value = 0.964 in African Americans. No association to schizophrenia was found for any of the nine markers typed in these populations at the allelic or the genotypic level. Negative
SZ rs10893385 FEZ1 Allelic P-value = 0.625, genotypic P-value = 0.551 in Caucasians. Allelic P-value = 0.450, genotypic P-value = 0.262 in African Americans. No association to schizophrenia was found for any of the nine markers typed in these populations at the allelic or the genotypic level. Negative
SZ rs12223186 FEZ1 Allelic P-value = 0.203, genotypic P-value = 0.363 in Caucasians. Allelic P-value = 0.877, genotypic P-value = 0.835 in African Americans. No association to schizophrenia was found for any of the nine markers typed in these populations at the allelic or the genotypic level. Negative
SZ rs10893380 FEZ1 Allelic P-value = 0.536, genotypic P-value = 0.450 in Caucasians. Allelic P-value = 0.716, genotypic P-value = 0.924 in African Americans. No association to schizophrenia was found for any of the nine markers typed in these populations at the allelic or the genotypic level. Negative

Haplotypes reported by this study for SZ/MDD
Disease Markers Haplotype Related Gene(s)/Region(s) Statistical Values Description Result Category
SZ rs2702009 - rs559668 - rs597570 - rs10893385 - rs1365410 - rs12223186 - rs2241514 - rs2907228 - rs10893380 1-1-1-2-2-2-2-1-2 FEZ1 P-value = 0.575 in Caucasians; P-value = 0.391 in African Americans No association was found in either population between specific haplotypes and any of the psychiatric disorders. Negative
SZ rs2702009 - rs559668 - rs597570 - rs10893385 - rs1365410 - rs12223186 - rs2241514 - rs2907228 - rs10893380 2-2-2-2-2-2-2-1-2 FEZ1 P-value = 0.414 in Caucasians; P-value = 0.860 in African Americans No association was found in either population between specific haplotypes and any of the psychiatric disorders. Negative
SZ rs2702009 - rs559668 - rs597570 - rs10893385 - rs1365410 - rs12223186 - rs2241514 - rs2907228 - rs10893380 2-2-2-2-2-2-2-2-1 FEZ1 P-value = 0.913 in Caucasians; P-value = 0.855 in African Americans No association was found in either population between specific haplotypes and any of the psychiatric disorders. Negative
SZ rs2702009 - rs559668 - rs597570 - rs10893385 - rs1365410 - rs12223186 - rs2241514 - rs2907228 - rs10893380 1-2-2-1-2-2-2-1-2 FEZ1 P-value = 0.375 in Caucasians; P-value = 0.161 in African Americans No association was found in either population between specific haplotypes and any of the psychiatric disorders. Negative
SZ rs2702009 - rs559668 - rs597570 - rs10893385 - rs1365410 - rs12223186 - rs2241514 - rs2907228 - rs10893380 1-2-2-1-2-1-1-1-2 FEZ1 P-value = 0.460 in Caucasians; P-value = 0.713 in African Americans No association was found in either population between specific haplotypes and any of the psychiatric disorders. Negative

Genes reported by this study for SZ/MDD
Disease Gene Description Result Category
SZ FEZ1 No association to schizophrenia was found for any of the nine markers typed in these populations at the allelic or the genotypic level. Additionally no association was found in either population between specific haplotypes and any of the psychiatric disorders. Variation at the FEZ1 locus does not play a significant role in the etiology of schizophrenia in North American Caucasian or African American populations. Negative