BDgene

Study Report

Basic Info
Reference
Citation Thomson, P. A., A. Christoforou, et al. (2007). "Association of Neuregulin 1 with schizophrenia and bipolar disorder in a second cohort from the Scottish population." Mol Psychiatry 12(1): 94-104.
Disease Type Bipolar Disorder & Schizophrenia
Study Design case-control
Study Type Candidate-gene association study
Sample Size 368 BP patients, 386 SCZ patients and 455 controls
SNP/Region/Marker Size 40 SNPs
Predominant Ethnicity Caucasian
Population Scottish
Gender SCZ (276 male and 110 female), BP (160 male, 208 female), control (237 male, 218 female)

Detail Info

Genetic factors reported by this study for BD
SNPs reported by this study for BD (count: 36)

Haplotypes reported by this study for BD (count: 29)

Other variants reported by this study for BD (count: 4)

Genes reported by this study for BD (count: 1)

Genetic factors reported by this study for SZ and/or MDD
SNPs reported by this study for SZ/MDD
Disease SNP Related Gene(s) Statistical Values Description Result Category
SZ rs10093464 NRG1 Individual P-value = 0.6394 for SCZ , Individual P-value = 0.9223 for SCZ and BP Negative
SZ rs10091429 NRG1 Individual P-value = 0.5259 for SCZ , Individual P-value = 0.9077 for SCZ and BP Negative
SZ rs2439286 NRG1 Individual P-value = 0.6369 for SCZ , Individual P-value = 0.5518 for SCZ and BP Negative
SZ rs2439300 NRG1 Individual P-value = 0.4052 for SCZ , Individual P-value = 0.9469 for SCZ and BP Negative
SZ rs1948098 NRG1 Individual P-value = 0.3353 for SCZ , Individual P-value = 0.3572 for SCZ and BP Negative
SZ rs2347501 NRG1 NRG1-IT3 Individual P-value = 0.5084 for SCZ , Individual P-value = 0.5315 for SCZ and BP Negative
SZ rs1503491 NRG1 Individual P-value = 0.609 for SCZ , Individual P-value = 0.7019 for SCZ and BP Negative
SZ rs1545961 NRG1 Individual P-value = 0.3823 for SCZ , Individual P-value = 0.1336 for SCZ and BP Negative
SZ rs1481762 NRG1 NRG1-IT1 Individual P-value = 0.5544 for SCZ , Individual P-value = 0.5402 for SCZ and BP Negative
SZ rs1487141 NRG1 Individual P-value = 0.9662 for SCZ , Individual P-value = 0.8195 for SCZ and BP Negative
SZ rs10954842 NRG1 Individual P-value = 0.7634 for SCZ , Individual P-value = 0.9317 for SCZ and BP Negative
SZ rs1481747 NRG1 Individual P-value = 0.7276 for SCZ , Individual P-value = 0.9216 for SCZ and BP Negative
SZ rs10503932 NRG1 Individual P-value = 0.566 for SCZ , Individual P-value = 0.494 for SCZ and BP Negative
SZ rs10954811 NRG1 Individual P-value = 0.6247 for SCZ , Individual P-value = 0.8101 for SCZ and BP Negative
SZ rs10103750 NRG1 Individual P-value = 0.2753 for SCZ , Individual P-value = 0.6566 for SCZ and BP Negative
SZ rs10113797 NRG1 Individual P-value = 0.1911 for SCZ , Individual P-value = 0.1981 for SCZ and BP Negative
SZ rs10095694 NRG1 Individual P-value = 0.0087 for SCZ , Individual P-value = 0.006 for SCZ and BP This marker is nominally significant in the combined sample Positive
SZ rs10096770 NRG1 Individual P-value = 0.9176 for SCZ , Individual P-value = 0.5636 for SCZ and BP Negative
SZ rs6468099 NRG1 Individual P-value = 0.7519 for SCZ , Individual P-value = 0.5716 for SCZ and BP Negative
SZ rs553950 NRG1 Individual P-value = 0.0288 for SCZ , Individual P-value = 0.0109 for SCZ and BP This SNP is nominally significant in all three groups: BP, SCZ and combined. Positive
SZ rs6988339 NRG1 Individual P-value = 0.0103 for SCZ , Individual P-value = 0.0058 for SCZ and BP This marker is nominally significant in the combined sample Positive
SZ rs6986716 NRG1 Individual P-value = 0.991 for SCZ , Individual P-value = 0.5832 for SCZ and BP Negative
SZ rs7015249 NRG1 Individual P-value = 0.1964 for SCZ , Individual P-value = 0.3427 for SCZ and BP Negative
SZ rs7007662 NRG1 NRG1-IT1 Individual P-value = 0.7023 for SCZ , Individual P-value = 0.7981 for SCZ and BP Negative
SZ rs901561 NRG1 Individual P-value = 0.7958 for SCZ , Individual P-value = 0.9163 for SCZ and BP Negative
SZ rs726908 NRG1 Individual P-value = 0.6665 for SCZ , Individual P-value = 0.5578 for SCZ and BP Negative
SZ rs2919390 NRG1 Individual P-value = 0.0096 for SCZ , Individual P-value = 0.0105 for SCZ and BP This marker is nominally significant in the combined sample Positive
SZ rs2439305 NRG1 Individual P-value = 0.6679 for SCZ , Individual P-value = 0.752 for SCZ and BP Negative
SZ rs3757930 NRG1 Individual P-value = 0.2035 for SCZ , Individual P-value = 0.1164 for SCZ and BP Negative
SZ rs327329 NRG1 Individual P-value = 0.4418 for SCZ , Individual P-value = 0.7353 for SCZ and BP Negative
SZ rs4513929 NRG1 Individual P-value = 0.4213 for SCZ , Individual P-value = 0.9227 for SCZ and BP Negative
SZ rs4298458 NRG1 Individual P-value = 0.6152 for SCZ , Individual P-value = 0.9032 for SCZ and BP Negative
SZ rs4733140 NRG1 Individual P-value = 0.6035 for SCZ , Individual P-value = 0.8239 for SCZ and BP Negative
SZ rs4733132 NRG1 Individual P-value = 0.5628 for SCZ , Individual P-value = 0.2859 for SCZ and BP Negative
SZ rs9656744 NRG1 Individual P-value = 0.8711 for SCZ , Individual P-value = 0.5984 for SCZ and BP Negative
SZ rs9886497 NRG1 Individual P-value = 0.2086 for SCZ , Individual P-value = 0.2653 for SCZ and BP Negative

Haplotypes reported by this study for SZ/MDD
Disease Markers Haplotype Related Gene(s)/Region(s) Statistical Values Description Result Category
SZ rs2919390 - rs6988339 NRG1 P-value = 0.0012 for SZ, P-value = 0.0008 for SCZ and BP Positive
SZ rs2439286 - rs10095694 - rs2919390 NRG1 P-value = 0.0017 for SCZ and BP Positive
SZ rs2919390 - rs6988339 - rs3757930 NRG1 P-value = 0.0001 for SZ, P-value = 0.0001 for SCZ and BP the most significant haplotype in SCZ was also nominally significant in the BP sample; this was the only haplotype to withstand permutation analysis in this study, identifying a new region of association with both schizophrenia and the combined case group in the Scottish population Positive
SZ rs2439286 - rs10095694 - rs2919390 - rs6988339 NRG1 P-value = 0.0003 for SZ, P-value = 0.0002 for SCZ and BP Positive
SZ rs1503491 - rs553950 - rs327329 - rs7007662 NRG1 P-value = 0.0007 for SZ, P-value = 0.0029 for SZ and BP combined Positive
SZ rs2439300 - rs2439286 - rs10095694 - rs2919390 NRG1 P-value = 0.0097 for SZ and BP combined Positive
SZ rs2439305 - rs2439300 - rs2439286 - rs10095694 NRG1 P-value = 0.0098 for SZ and BP combined Positive
SZ rs2439286 - rs10095694 NRG1 P-value = 0.0037 for SZ, P-value = 0.0028 for SCZ and BP Positive
SZ rs553950 - rs327329 - rs7007662 - rs1481762 NRG1 P-value = 0.0167 for SZ, P-value = 0.0145 for SZ and BP combined Positive
SZ rs1503491 - rs553950 NRG1 P-value = 0.0243 for SZ, P-value = 0.0117 for SZ and BP combined Positive
SZ rs6988339 - rs3757930 NRG1 P-value = 0.0014 for SZ, P-value = 0.0004 for SCZ and BP Positive
SZ rs1503491 - rs553950 - rs327329 T-T-T NRG1 P-value = 0.0003 for SZ, P-value = 0.0017 for SZ and BP combined 3-SNP haplotype is nominally significant with SCZ alone, but it does not withstand permutation analysis Positive
SZ rs2919390 - rs6988339 - rs3757930 - rs10103750 NRG1 P-value = 0.0003 for SZ, P-value = 0.0001 for SCZ and BP Positive
SZ rs10954811 - rs1503491 - rs553950 NRG1 P-value = 0.0146 for SZ, P-value = 0.0078 for SZ and BP combined Positive
SZ rs553950 - rs327329 - rs7007662 NRG1 P-value = 0.0099 for SZ, P-value = 0.0034 for SZ and BP combined Positive
SZ rs10954811 - rs1503491 - rs553950 - rs327329 NRG1 P-value = 0.0003 for SZ, P-value = 0.0018 for SZ and BP combined Positive
SZ rs10095694 - rs2919390 - rs6988339 - rs3757930 NRG1 P-value = 0.0003 for SZ, P-value = 0.0003 for SCZ and BP Positive
SZ rs10113797 - rs10954811 - rs1503491 - rs553950 NRG1 P-value = 0.0071 for SZ and BP combined Positive
SZ rs6988339 - rs3757930 - rs10103750 NRG1 P-value = 0.002 for SZ, P-value = 0.0005 for SCZ and BP Positive
SZ rs10095694 - rs2919390 NRG1 P-value = 0.002 for SZ, P-value = 0.0016 for SCZ and BP Positive
SZ rs6988339 - rs3757930 - rs10103750 - rs10503932 NRG1 P-value = 0.0048 for SZ, P-value = 0.002 for SCZ and BP Positive
SZ rs10095694 - rs2919390 - rs6988339 NRG1 P-value = 0.0002 for SZ, P-value = 0.0002 for SCZ and BP Positive

Other variants reported by this study for SZ/MDD
Disease Variant Name Related Gene Type Statistical Values Description Result Category
SZ NRG1 SNP8NRG241930 NRG1 point mutation Individual P-value = 0.6237 for SCZ , Individual P-value = 0.8147 for SCZ and BP Negative
SZ NRG1 SNP8NRG221533 NRG1 point mutation Individual P-value = 0.7189 for SCZ , Individual P-value = 0.7929 for SCZ and BP Negative
SZ NRG1 SNP8NRG221132 NRG1 point mutation Individual P-value = 0.994 for SCZ , Individual P-value = 0.7566 for SCZ and BP Negative
SZ NRG1 SNP8NRG243177 NRG1 point mutation Individual P-value = 0.8945 for SCZ , Individual P-value = 0.5341 for SCZ and BP Negative

Genes reported by this study for SZ/MDD
Disease Gene Description Result Category
SZ NRG1 Our study identifies a new of NRG1 region involved in schizophrenia and bipolar disorder in the Scottish population. Positive