Study Report

Basic Info
| Reference |
Papiol, S.,2004 PMID: 14985387
|
| Citation |
Papiol, S., A. Rosa, et al. (2004). "Interleukin-1 cluster is associated with genetic risk for schizophrenia and bipolar disorder." J Med Genet 41(3): 219-223.
|
| Disease Type |
Bipolar Disorder & Schizophrenia |
| Study Design |
case-control |
| Study Type |
Candidate-gene association study |
| Sample Size |
78 schizophrenic patients, 88 bipolar disorder patients, and 176 healthy controls. |
| SNP/Region/Marker Size |
2 variants |
| Predominant Ethnicity |
|
| Population |
Spanish |
| Age Group |
Adults
:
Mean age(SD)(year):44.8(14.9) for BD patients,31.1(7.5) for SZ patients and 39.82(10.35) for controls
|

Detail Info
| Sample Diagnosis |
DSM |
| Sample Status |
The schizophrenic patients' sample consisted of 78 unrelated DSM-IV diagnosed patients from two public mental health centres in Barcelona: the Mental Health Service of the Eixample district (n=38) and the Institut Municipal d'Urge`ncies Psiquia`triques (IMPU)(n=40). The mean evolution time ipatients since the first episode was 9.9 years (SD 7.8) and the mean age at onset, defined as the age at which psychotic symptoms first became evident, was 21.2 years (SD 4.6). A total of 88 unrelated patients meeting the DSM-III-R criteria for bipolar disorder recruited from Cl?_nica Mental Santa Coloma of Barcelona constituted the bipolar disorder patients' sample. The mean evolution time in patients since the first episode was 15.9 years (SD 12.9) and the mean age at onset was 29.5 years (SD 11.6).According to this interview, 67% of the sample showed a positive family history of severe mental disorder(schizophrenia, bipolar disorder, and/or severe major depression) in at least a first degree relative. This sample consistedof a group of inpatients presenting an extremely severe outcome (see Valle`s et al11 for additional details about the clinical profile of this sample and its psychiatric familial morbid risk).The control group consisted of 176 healthy individuals recruited from the catchment area of the hospitals involved in this study and can be considered to be representative of the general population of Barcelona. Additionally, the Spanish version of the 28-item General Health Questionnaire (GHQ)33 was used to assess current mental condition. All controls and patients showing a positive personal history of neurological disease, cancer, diabetes, or drug or alcohol abuse were excluded from the study. All cases and controls were of white Spanish origin, shared similar sociodemographic profiles and were comparable as regards the geographical origin of their families. |
| Technique |
genotyping |
| Statistical Method |
Simple X2 tests of independence were also performed to confirm the presence or absence of allele or genotype associations. The ARLEQUIN program was used to estimate the haplotypes and their frequencies according to genotype information (expectation maximisation (EM) algorithm) as well as to determine the statistical significance of linkage disequilibrium. |
| Result Summary |
A significant excess of the haplotypic combination 2511 allele*1/VNTR allele*2 was found both in schizophrenic (P = 0.0015; OR= 2.49 (95% confidence interval (CI): 1.33 to 4.64)) and bipolar patients(P = 0.004; OR= 2.26 (95% CI: 1.22 to 4.17)) when compared with controls. The highest risk conferred by this risk haplotype was detected in bipolar patients with a family history of schizophrenia, bipolar disorder, or severe major depression (P = 0.00009; OR = 3.18(95% CI: 1.66 to 6.05)).IL-1 cluster genetic variability may represent a shared genetic susceptibility factor both for schizophrenia and bipolar disorder. |

Genetic factors reported by this study for BD

SNPs reported by this study for BD (count: 1)
| SNP |
Related Gene(s) |
Allele Change |
Risk Allele |
Statistical Values |
Author Comments |
Result Category |
| rs16944 |
IL1B
|
C/T |
|
Association analysis: chi square test, Bipolar disorder v controls: allele: chi square= 1.48, P-value = 0.223; OR = 1.27 (95% CI: 0.85 to 1.90); genotype: chi square= 2.89; P-value = 0.235.Bipolar disorder FH+ v controls: allele: chi square=1.58, P-value = 0.208; OR=1.33 (95% CI: 0.84 to 2.14); genotype: chi square=1.79; P-value = 0.408.
|
No significant association was observed in BD.
No significant association was observed in BD.
|
Negative
|

Haplotypes reported by this study for BD (count: 1)
| Markers |
Haplotype |
Related Gene(s)/Region(s) |
Statistical Values |
Author Comments |
Result Category |
| rs16944 - (IL1RN_intron 2_VNTR) |
C-VNTR(A2) |
IL1B
IL1RN
|
Haplotype analysis:Bipolar disorder v controls:chi square= 9.81, global P-value = 0.043; chi square= 8.09, individual P-value = 0.004; OR = 2.26(95% CI: 1.22 to 4.17).Bipolar disorder FH+ v controls:chi square= 15.90, global P-value = 0.0031; chi square= 15.41, individual P-value = 0.00009; OR= 3.18 (95% CI: 1.66 to 6.05).
|
Significant association was found in BD.
Significant association was found in BD.
|
Positive
|

Other variants reported by this study for BD (count: 1)
| Variant Name |
Related Gene |
Type |
Allele Change |
Risk Allele |
Statistical Values |
Author Comments |
Result Category |
| IL1RN intron 2 VNTR |
IL1RN |
VNTR |
multi-allelic repeats |
|
Association analysis:chi square test, Bipolar disorder v controls: allele: chi square= 3.81, P-value = 0.15; genotype: chi square= 3.63; P-value = 0.30.Bipolar disorder FH+ v controls: allele: chi square= 4.50, P-value = 0.105; genotype: chi square= 4.08; P-value = 0.253.
|
No significant association was observed in BD.
No significant association was observed in BD.
|
Negative
|

Genes reported by this study for BD (count: 2)
| Gene |
Statistical Values/Author Comments |
Result Category |
| IL1RN |
IL-1 cluster genetic variability may represent a shared genetic susceptibility factor both for schiz......
IL-1 cluster genetic variability may represent a shared genetic susceptibility factor both for schizophrenia and bipolar disorder.
More...
|
Positive
|
| IL1B |
IL-1 cluster genetic variability may represent a shared genetic susceptibility factor both for schiz......
IL-1 cluster genetic variability may represent a shared genetic susceptibility factor both for schizophrenia and bipolar disorder.
More...
|
Positive
|

Gene-gene interactions reported by this study for BD (count: 1)
| Gene Group |
Markers |
Statistical Values |
Author Comments |
Result Category |
|
IL1B
IL1RN
|
rs16944 - (IL1RN_intron 2_VNTR) |
Haplotype analysis: Bipolar disorder v controls: chi square= 9.81, global P-value = 0.043; chi square= 8.09, individual P-value = 0.004; OR = 2.26(95% CI: 1.22 to 4.17). Bipolar disorder FH+ v controls: chi square = 15.90, global P-value = 0.0031; chi square= 15.41, individual P-value = 0.00009; OR= 3.18 (95% CI: 1.66 to 6.05).
|
Significant association was found in BD.
Significant association was found in BD.
|
Positive
|

Genetic factors reported by this study for SZ and/or MDD

SNPs reported by this study for SZ/MDD
| Disease |
SNP |
Related Gene(s) |
Statistical Values |
Description |
Result Category |
| SZ |
rs16944 |
IL1B
|
Association analysis:chi square test, Schizophrenia v controls: allele: chi square= 3.79, P-value = 0.051; OR = 1.50 (95% CI: 0.98 to 2.31); genotype: chi square= 4.26, P-value = 0.119. |
No significant association was observed in SZ. |
Negative |

Haplotypes reported by this study for SZ/MDD
| Disease |
Markers |
Haplotype |
Related Gene(s)/Region(s) |
Statistical Values |
Description |
Result Category |
| SZ |
rs16944 - (IL1RN_intron 2_VNTR) |
C-VNTR(A2) |
IL1B
IL1RN
|
Haplotype analysis:Schizophrenia v controls: chi square= 12.70, global P-value = 0.012; chi square= 9.99, individual P-value = 0.0015; OR = 2.49(95% CI: 1.33 to 4.64). |
Significant association was found in SZ. |
Positive |

Other variants reported by this study for SZ/MDD
| Disease |
Variant Name |
Related Gene |
Type |
Statistical Values |
Description |
Result Category |
| SZ |
IL1RN intron 2 VNTR |
IL1RN |
VNTR |
Association analysis:chi square test, Schizophrenia v controls: allele: chi square= 0.33, P-value = 0.84; genotype: chi square= 1.62, P-value = 0.65. |
No significant association was observed in SZ. |
Negative |

Genes reported by this study for SZ/MDD
| Disease |
Gene |
Description |
Result Category |
| SZ |
IL1RN |
IL-1 cluster genetic variability may represent a shared genetic susceptibility factor both for schizophrenia and bipolar disorder. |
Positive |
| SZ |
IL1B |
IL-1 cluster genetic variability may represent a shared genetic susceptibility factor both for schizophrenia and bipolar disorder. |
Positive |

Gene-gene interactions reported by this study for SZ/MDD
| Disease |
Gene Group |
Markers |
Statistical Values |
Description |
Result Category |
| SZ |
|
rs16944 - (IL1RN_intron 2_VNTR) |
Haplotype analysis:Schizophrenia v controls: chi square= 12.70, global P-value = 0.012; chi square= 9.99, individual P-value = 0.0015; OR = 2.49(95% CI: 1.33 to 4.64). |
Significant association was found in SZ. |
Positive |