Study Report

Basic Info
| Reference |
Walker, R. M.,2010 PMID: 20435087
|
| Citation |
Walker, R. M., A. Christoforou, et al. (2010). "Association analysis of Neuregulin 1 candidate regions in schizophrenia and bipolar disorder." Neurosci Lett 478(1): 9-13.
|
| Disease Type |
Bipolar Disorder & Schizophrenia |
| Study Design |
case-control |
| Study Type |
Candidate-gene association study |
| Sample Size |
307 control, 303 SCZ, and 239 BPD subjects in the Scottish 2 sample,397 control, 396 SCZ, and 400 BPD subjects in the German sample |
| SNP/Region/Marker Size |
5 SNPs |
| Predominant Ethnicity |
Caucasian |
| Population |
Scottish and German |

Detail Info
| Sample Diagnosis |
DSM |
| Sample Status |
The Scottish 1 case-control sample has been described previously. For the Scottish 2 sample, individuals diagnosed with BPD or SCZ were recruited from inpatient and outpatient services at psychiatric hospitals in South-East and South-Central Scotland, and from Ravenscraig Hospital, Greenock, Inverclyde. Control subjects in the Scottish 2 sample were recruited from the same population in South-East and South-Central Scotland and from the Grampian region of Scotland, with the majority (>80%) recruited through the Scottish National Blood Transfusion Service, which only accepts individuals who are not currently taking medication and do not have a chronic illness.The German case-control sample comprised individuals with a lifetime diagnosis of BPD or SCZ, according to DSM-IV criteria, who were recruited from consecutive admissions to the inpatient unit of the Department of Psychiatry and Psychotherapy of the University of Bonn and of the Central Institute of Mental Health in Mannheim.German control subjects were recruited from the Bonn region of Germany. Both the patient and the control samples were of German ancestry, extending back at least three generations.Following these quality control measures, genotype data was available for five SNPs (three region A SNPs and two region B SNPs) in 307 control, 303 SCZ, and 239 BPD subjects in the Scottish 2 sample, and for the three region B SNPs in 397 control, 396 SCZ, and 400 BPD subjects in the German sample. |
| Technique |
genotyping |
| Statistical Method |
X2 test |
| Result Summary |
No evidence was found for association in the new samples when analysed individually; however, in the joint analysis of the two Scottish samples, a region B haplotype comprising two SNPs (rs6988339 and rs3757930) was associated with SCZ and the combined case group (SCZ: p=0.0037, OR=1.3, 95% CI: 1.1-1.6; BPD+SCZ: p=0.0080, OR=1.2, 95% CI: 1.1-1.5), with these associations withstanding multiple testing correction at the single-test level (SCZ: p(st)=0.022; BPD+SCZ: p(st)=0.044). This study supports the involvement of NRG1 variants in the less well studied 3' region in conferring susceptibility to SCZ and BPD in the Scottish population. |

Genetic factors reported by this study for BD

SNPs reported by this study for BD (count: 6)
| SNP |
Related Gene(s) |
Allele Change |
Risk Allele |
Statistical Values |
Author Comments |
Result Category |
| rs553950 |
NRG1
|
|
|
X2 test: P-value = 0.028 for Scottish 1, P-value = 0.95 for Scottish 2, P-value = 0.11 for merged Scottish
|
Significant association was found in BD.
Significant association was found in BD.
|
Positive
|
| rs6988339 |
NRG1
|
|
|
X2 test: P-value = 0.032 for Scottish 1, P-value = 0.14 for Scottish 2, P-value = 0.19 for German, P-value = 0.55 for merged Scottish, P-value = 0.19 for merged all
|
Significant association was found in BD.
Significant association was found in BD.
|
Positive
|
| rs1503491 |
NRG1
|
|
|
X2 test: P-value = 0.24 for Scottish 1, P-value = 0.61 for Scottish 2, P-value = 0.51 for merged Scottish
|
No significant association was observed in BD.
No significant association was observed in BD.
|
Negative
|
| rs2919390 |
NRG1
|
|
|
X2 test: P-value = 0.08 for Scottish 1, P-value = 0.073 for German
|
Significant association was found in BD.
Significant association was found in BD.
|
Positive
|
| rs327329 |
NRG1
|
|
|
X2 test: P-value = 0.85 for Scottish 1, P-value = 0.58 for Scottish 2, P-value = 0.85 for merged Scottish
|
No significant association was observed in BD.
No significant association was observed in BD.
|
Negative
|
| rs3757930 |
NRG1
|
|
|
X2 test: P-value = 0.16 for Scottish 1, P-value = 0.57 for Scottish 2, P-value = 0.35 for German, P-value = 0.17 for merged Scottish, P-value = 0.7 for merged all
|
No significant association was observed in BD.
No significant association was observed in BD.
|
Negative
|

Haplotypes reported by this study for BD (count: 6)
| Markers |
Haplotype |
Related Gene(s)/Region(s) |
Statistical Values |
Author Comments |
Result Category |
| rs2919390 - rs6988339 - rs3757930 |
|
NRG1
|
Haplotypic association:P-value = 0.0022 for Scottish 1, P-value = 0.24 for German
|
Significant association was found in BD.
Significant association was found in BD.
|
Positive
|
| rs2919390 - rs6988339 |
|
NRG1
|
Haplotypic association:P-value = 0.014 for Scottish 1, P-value = 0.12 for German
|
Significant association was found in BD.
Significant association was found in BD.
|
Positive
|
| rs6988339 - rs3757930 |
|
NRG1
|
Haplotypic association:P-value = 0.0045 for Scottish 1, P-value = 0.45 for Scottish 2, P-value = 0.34 for German, P-value = 0.072 for merged Scottish, P-value = 0.072 for merged all
|
Significant association was found in BD.
Significant association was found in BD.
|
Positive
|
| rs553950 - rs327329 |
|
NRG1
|
Haplotypic association:P-value = 0.044 for Scottish 1, P-value = 0.3 for Scottish 2, P-value = 0.058 for merged Scottish
|
Significant association was found in BD.
Significant association was found in BD.
|
Positive
|
| rs1503491 - rs553950 |
|
NRG1
|
Haplotypic association:P-value = 0.037 for Scottish 1, P-value = 0.79 for Scottish 2, P-value = 0.14 for merged Scottish
|
Significant association was found in BD.
Significant association was found in BD.
|
Positive
|
| rs1503491 - rs553950 - rs327329 |
|
NRG1
|
Haplotypic association:P-value = 0.084 for Scottish 1, P-value = 0.57 for Scottish 2, P-value = 0.69 for merged Scottish
|
No significant association was found .
No significant association was found .
|
Negative
|

Genes reported by this study for BD (count: 1)
| Gene |
Statistical Values/Author Comments |
Result Category |
| NRG1 |
This study supports the involvement of NRG1 variants in the less well studied 3 region in conferrin......
This study supports the involvement of NRG1 variants in the less well studied 3 region in conferring susceptibility to SCZ and BPD in the Scottish population.
More...
|
Positive
|

Genetic factors reported by this study for SZ and/or MDD

SNPs reported by this study for SZ/MDD
| Disease |
SNP |
Related Gene(s) |
Statistical Values |
Description |
Result Category |
| SZ |
rs1503491 |
NRG1
|
X2 test:P-value = 0.61 for Scottish 1, P-value = 0.94 for Scottish 2, P-value = 0.86 for merged Scottish |
No significant association was observed. |
Negative |
| SZ |
rs3757930 |
NRG1
|
X2 test:P-value = 0.2 for Scottish 1, P-value = 0.69 for Scottish 2, P-value = 0.16 for German, P-value = 0.17 for merged Scottish, P-value = 0.85 for merged all |
No significant association was observed. |
Negative |
| SZ |
rs553950 |
NRG1
|
X2 test:P-value = 0.028 for Scottish 1, P-value = 0.99 for Scottish 2, P-value = 0.093 for merged Scottish |
Significant association was found. |
Positive |
| SZ |
rs2919390 |
NRG1
|
X2 test:P-value = 0.01 for Scottish 1, P-value = 0.92 for German |
Significant association was found. |
Positive |
| SZ |
rs327329 |
NRG1
|
X2 test:P-value = 0.44 for Scottish 1, P-value = 0.99 for Scottish 2, P-value = 0.56 for merged Scottish |
No significant association was observed. |
Negative |
| SZ |
rs6988339 |
NRG1
|
X2 test:P-value = 0.01 for Scottish 1, P-value = 0.55 for Scottish 2, P-value = 0.38 for German, P-value = 0.024 for merged Scottish, P-value = 0.22 for merged all |
Significant association was found. |
Positive |

Haplotypes reported by this study for SZ/MDD
| Disease |
Markers |
Haplotype |
Related Gene(s)/Region(s) |
Statistical Values |
Description |
Result Category |
| SZ |
rs553950 - rs327329 |
|
NRG1
|
Haplotypic association:P-value = 0.0085 for Scottish 1, P-value = 0.68 for Scottish 2, P-value = 0.074 for merged Scottish |
Significant association was found in SZ. |
Positive |
| SZ |
rs6988339 - rs3757930 |
|
NRG1
|
Haplotypic association:P-value = 0.0014 for Scottish 1, P-value = 0.48 for Scottish 2, P-value = 0.26 for German, P-value = 0.0037 for merged Scottish, P-value = 0.098 for merged all |
Significant association was found in SZ. |
Positive |
| SZ |
rs1503491 - rs553950 |
|
NRG1
|
Haplotypic association:P-value = 0.024 for Scottish 1, P-value = 0.87 for Scottish 2, P-value = 0.096 for merged Scottish |
Significant association was found in SZ. |
Positive |
| SZ |
rs1503491 - rs553950 - rs327329 |
|
NRG1
|
Haplotypic association:P-value = 0.00032 for Scottish 1, P-value = 0.61 for Scottish 2, P-value = 0.028 for merged Scottish |
Significant association was found in SZ. |
Positive |
| SZ |
rs2919390 - rs6988339 |
|
NRG1
|
Haplotypic association:P-value = 0.0012 for Scottish 1, P-value = 0.31 for German |
Significant association was found in SZ. |
Positive |
| SZ |
rs2919390 - rs6988339 - rs3757930 |
|
NRG1
|
Haplotypic association:P-value = 0.00014 for Scottish 1, P-value = 0.17 for German |
Significant association was found in SZ. |
Positive |

Genes reported by this study for SZ/MDD
| Disease |
Gene |
Description |
Result Category |
| SZ |
NRG1 |
This study supports the involvement of NRG1 variants in the less well studied 3 region in conferring susceptibility to SCZ and BPD in the Scottish population. |
Positive |