BDgene

Study Report

Basic Info
Reference
Citation Thomson, P. A., N. R. Wray, et al. (2005). Sex-specific association between bipolar affective disorder in women and GPR50, an X-linked orphan G protein-coupled receptor. Mol Psychiatry 10(5): 470-478.
Disease Type Bipolar Disorder & Schizophrenia & Major Depressive Disorder
Study Design case-control
Study Type Candidate-gene association study
Sample Size subjects with BPAD (264), major depressive disorder (MDD) (226), or schizophrenia (SCZ) (263) and ethnically matched controls (562)
SNP/Region/Marker Size 3 polymorphisms
Predominant Ethnicity Caucasian
Population Scottish
Gender Male/female:302/260 in controls,121/143 in patients with BPAD,90/136 in patients with MDD,187/76 in patients with SCZ,7/15 in patients with BPspec

Detail Info

Genetic factors reported by this study for BD
SNPs reported by this study for BD (count: 2)

Haplotypes reported by this study for BD (count: 4)

Other variants reported by this study for BD (count: 1)

Genes reported by this study for BD (count: 1)

Genetic factors reported by this study for SZ and/or MDD
SNPs reported by this study for SZ/MDD
Disease SNP Related Gene(s) Statistical Values Description Result Category
SZ rs2072621 GPR50 GPR50-AS1 Single marker association:for SCZ, allele P-value = 0.31(all), P-value = 0.16(male), P-value = 0.0014(female) Association was not observed in SCZ, but was in observed SCZ(female). Negative
SZ rs13440581 GPR50 GPR50-AS1 Single marker association:for SCZ, allele P-value = 0.3(all), P-value = 0.84(male), P-value = 0.4(female) No significant association was observed. Negative
MDD rs2072621 GPR50 GPR50-AS1 Single marker association:for MDD, allele P-value = 0.58(all), P-value = 0.19(male), P-value = 0.97(female) No association was observed. Negative
MDD rs13440581 GPR50 GPR50-AS1 Single marker association:for MDD, allele P-value = 0.04(all), P-value = 0.99(male), P-value = 0.0096(female) Association was observed in MDD and MDD(female). Positive

Haplotypes reported by this study for SZ/MDD
Disease Markers Haplotype Related Gene(s)/Region(s) Statistical Values Description Result Category
SZ rs2072621 - (GPR50_502-505) GPR50 Haplotypic association:, for SCZ, P-value = 0.16(all), 0.3(female) No association was observed. Negative
SZ (GPR50_502-505) - rs13440581 GPR50 Haplotypic association:, for SCZ, P-value = 0.18(all), 0.3(female) No association was observed. Negative
SZ rs2072621 - rs13440581 GPR50 Haplotypic association:, for SCZ, P-value = 0.63(all), 0.76(female) No association was observed. Negative
SZ rs2072621 - (GPR50_502-505) - rs13440581 GPR50 Haplotypic association:, for SCZ, P-value = 0.078(all), 0.068(female) No association was observed. Negative
MDD rs2072621 - (GPR50_502-505) GPR50 Haplotypic association:, for MDD, P-value = 0.055(all), 0.36(female) No association was observed. Negative
MDD (GPR50_502-505) - rs13440581 GPR50 Haplotypic association:, for MDD, P-value = 0.1(all), 0.67(female) No association was observed. Negative
MDD rs2072621 - rs13440581 GPR50 Haplotypic association:, for MDD, P-value = 0.069(all), 0.27(female) No association was observed. Negative
MDD rs2072621 - (GPR50_502-505) - rs13440581 GPR50 Haplotypic association:, for MDD, P-value = 0.14(all), 0.6(female) No association was observed. Negative

Other variants reported by this study for SZ/MDD
Disease Variant Name Related Gene Type Statistical Values Description Result Category
SZ GPR50 delta502-505 GPR50 insertion/deletion Single marker association:for SCZ, allele P-value = 0.12(all), P-value = 0.15(male), P-value = 0.92(female) No significant association was observed. Negative
MDD GPR50 delta502-505 GPR50 insertion/deletion Single marker association:for MDD, allele P-value = 0.011(all), P-value = 0.48(male), P-value = 0.0064(female) Association was observed in MDD and MDD(female). Positive

Genes reported by this study for SZ/MDD
Disease Gene Description Result Category
SZ GPR50 There is weaker evidence of an association with schizophrenia also in female subjects. Trend
MDD GPR50 We have shown that GPR50 is a strong candidate gene for female-associated affective disorder. Positive