SNP Report

Basic Info

Name	rs9411508 dbSNP Ensembl
Location	chrCHR_HG2030_PATCH:133320932 - 133320932(1)
Variant Alleles	A/C
Ancestral Allele	C
Minor Allele	A
Minor Allele Frequence	0.0964457
Functional Annotation	downstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000372030, ENST00000627503)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	YES
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Bergen, S. E.,2012		A	logistic regression: P-value > E-05 logistic regression: P-value > E-05	No significant association was observed in BD. No significant association was observed in BD.	Negative

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
SURF6	surfeit 6	9q33-q34	1(0/1/0)
LCN1P2	lipocalin 1 pseudogene 2	9q34.2	Mapped by Literature SNP

SNPs in LD with rs9411508 (count: 0) View in gBrowse (chrCHR_HG2030_PATCH:133320932..133320932 )

Overlap with SZ from cross-disorder studies (count: 1)

Reference	Statistical Result	Description	Result Category
Bergen, S. E.,2012	logistic regression:for SZ full sample, OR=0.49, P-value = 8.59E-06	No significant association was observed in SZ.	Negative

Overlap with MDD from cross-disorder studies (count: 0)