SNP Report

Basic Info

Name	rs916005 dbSNP Ensembl
Location	chr22:50605815 - 50605815(1)
Variant Alleles	C/T
Ancestral Allele	C
Minor Allele	T
Minor Allele Frequence	0.0125799
Functional Annotation	intron_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	intron_variant(ENST00000008876, ENST00000329492); non_coding_transcript_variant(ENST00000008876); upstream_gene_variant(ENST00000463053)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	YES
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Severinsen, J. E., 2006 (b)	G/A		P-value = 0.8427 in BD, P-value = 1 in BD and SZ P-value = 0.8427 in BD, P-value = 1 in BD and SZ		Negative

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
MAPK8IP2	mitogen-activated protein kinase 8 interacting protein 2	22q13.33	1(0/1/0)
CHKB	choline kinase beta	22q13.33	Mapped by Literature SNP

SNPs in LD with rs916005 (count: 0) View in gBrowse (chr22:50605815..50605815 )

Overlap with SZ from cross-disorder studies (count: 1)

Reference	Statistical Result	Description	Result Category
Severinsen, J. E., 2006 (b)	P-value = 0.8482 in SZ, P-value = 1 in BD and SZ		Negative

Overlap with MDD from cross-disorder studies (count: 0)