SNP Report

Basic Info

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Amano, K., 2008	G/C		Genotypic P-value = 0.1810, allelic P-value = 0.1672 for BD ...... Genotypic P-value = 0.1810, allelic P-value = 0.1672 for BD when compared with controls More...		Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
DSCAM	Down syndrome cell adhesion molecule	21q22.2-q22.3	3(1/2/0)

SNPs in LD with rs914163 (count: 27) View in gBrowse (chr21:40562935..40594746 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²<=0.8.

rs_ID	Functional Annotation	r²[population]
rs9975941	intron_variant	0.913[CEU]; 0.849[JPT]
rs1467751	intron_variant	0.887[CEU]; 0.951[CHB]; 0.892[JPT]
rs2837709	intron_variant	1.0[CEU]; 0.897[JPT]
rs9976207	intron_variant	0.961[CEU]
rs2837713	intron_variant	0.922[CEU]; 1.0[CHB]; 1.0[JPT]
rs4818144	intron_variant	1.0[CEU]; 0.819[JPT]
rs2837707	intron_variant	1.0[CEU]; 0.897[JPT]
rs9984812	intron_variant	1.0[CEU]; 0.901[JPT]
rs455304	intron_variant	0.902[CHB]
rs2178841	intron_variant	1.0[CEU]; 1.0[CHB]; 1.0[JPT]
rs2837712	intron_variant	0.963[CEU]; 1.0[CHB]; 1.0[JPT]
rs2837710	intron_variant	1.0[CEU]; 0.897[JPT]
rs2837716	intron_variant	0.885[CEU]; 1.0[CHB]; 1.0[JPT]
rs2837738	intron_variant	1.0[CEU]
rs460181	intron_variant	0.905[CHB]
rs2837717	intron_variant	1.0[CEU]; 0.819[JPT]
rs2837736	intron_variant	1.0[CEU]
rs459825	intron_variant	0.902[CHB]
rs926085	intron_variant	1.0[CEU]; 0.819[JPT]
rs4346468	intron_variant	1.0[CEU]; 0.819[JPT]
rs2410255	intron_variant	1.0[CEU]
rs9974879	intron_variant	1.0[CEU]; 0.903[JPT]
rs460541	intron_variant	0.905[CHB]
rs2837730	intron_variant	1.0[CEU]
rs8129524	intron_variant	0.812[JPT]
rs9305700	intron_variant	1.0[CEU]
rs9981739	intron_variant	1.0[CEU]; 0.897[JPT]

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)