SNP Report

Basic Info

Name	rs8081273 dbSNP Ensembl
Location	chr17:2319031 - 2319031(1)
Variant Alleles	C/T
Ancestral Allele	T
Minor Allele	T
Minor Allele Frequence	0.496406
Functional Annotation	downstream_gene_variant; intron_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000301364, ENST00000570662, ENST00000572709, ENST00000574229, ENST00000575840); intron_variant(ENST00000344595, ENST00000574987, ENST00000576620, ENST00000576848)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Schirmbeck, F., 2007	C/T		no P-value given in the orignial article no P-value given in the orignial article	allele and haplotype frequencies did not differ between case...... allele and haplotype frequencies did not differ between cases and controls More...	Negative

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
TSR1	TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)	17p13.3	Mapped by Literature SNP
SRR	serine racemase	17p13	1(0/1/0)

SNPs in LD with rs8081273 (count: 0) View in gBrowse (chr17:2319031..2319031 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)