SNP Report

Basic Info

Name	rs7848810 dbSNP Ensembl
Location	chr9:90645576 - 90645576(1)
Variant Alleles	C/A
Ancestral Allele	C
Minor Allele	A
Minor Allele Frequence	0.305112
Functional Annotation	upstream_gene_variant.
Consequence to Transcript	upstream_gene_variant(ENST00000375765, ENST00000636786, ENST00000637905)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Reif, A.,2011	C/A	C	X² test: P-value = 0.1645, OR=1.17, 95%CI=0.94-1....... X² test: P-value = 0.1645, OR=1.17, 95%CI=0.94-1.47 More...	No significant association was observed. No significant association was observed.	Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
DIRAS2	DIRAS family, GTP-binding RAS-like 2	9q22.32	1(1/0/0)

SNPs in LD with rs7848810 (count: 9) View in gBrowse (chr9:90644048..90677287 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²<=0.8.

rs_ID	Functional Annotation	r²[population]
rs4744000		1.0[CEU]; 0.946[TSI]
rs7030418		1.0[CEU]
rs10821483		0.811[CEU]
rs7859015		0.947[CEU]; 0.946[TSI]
rs10993624		0.946[CEU]
rs4744474		1.0[CEU]
rs1360474	upstream_gene_variant	1.0[CEU]; 0.973[TSI]
rs7854744	upstream_gene_variant	0.852[CEU]; 0.865[TSI]
rs10821481		1.0[CEU]

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)