BDgene

SNP Report

Basic Info
Name rs78052302 dbSNP Ensembl
Location chr2:75053594 - 75053594(1)
Variant Alleles C/A
Ancestral Allele C
Minor Allele A
Minor Allele Frequence 9.98403E-4
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000305249, ENST00000409848)
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Sharp S.I., 2014 -/T P-value=0.15, OR=1.37, 95%CI=0.89-2.11 P-value=0.15, OR=1.37, 95%CI=0.89-2.11 No significant association was observed. No significant association was observed. Negative

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
TACR1 tachykinin receptor 1 2p13.1-p12 3(3/0/0)

SNPs in LD with rs78052302 (count: 0) View in gBrowse (chr2:75053594..75053594 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)