SNP Report

Basic Info

Name	rs7797944 dbSNP Ensembl
Location	chr7:151691164 - 151691164(1)
Variant Alleles	C/T
Ancestral Allele	C
Minor Allele	T
Minor Allele Frequence	0.119209
Functional Annotation	intron_variant; NMD_transcript_variant; non_coding_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000287878, ENST00000392801, ENST00000461529, ENST00000481434, ENST00000487375, ENST00000488258, ENST00000492843); NMD_transcript_variant(ENST00000488258); non_coding_transcript_variant(ENST00000461529, ENST00000481434, ENST00000487375)
No. of Studies	1 (Positive: 1; Negative: 0; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Chen, X., 2015	C/T		P-value=9.89E-28,Â OR=0.32, 95%CI=0.26-0.26 P-value=9.89E-28,Â OR=0.32, 95%CI=0.26-0.26	Chromosome 7 associated SNPs and flanking genes for bipolar ...... Chromosome 7 associated SNPs and flanking genes for bipolar disorder (BPD) from Affymetrix Genome-wide Human SNP Array 6.0 in the population of Shandong province of China. More...	Positive

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
PRKAG2	protein kinase, AMP-activated, gamma 2 non-catalytic subunit	7q35-q36	1(1/0/0)

SNPs in LD with rs7797944 (count: 0) View in gBrowse (chr7:151691164..151691164 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)