BDgene

SNP Report

Basic Info
Name rs778334 dbSNP Ensembl
Location chr13:105507319 - 105507319(1)
Variant Alleles G/A/T
Ancestral Allele G
Minor Allele T
Minor Allele Frequence 0.00299521
Functional Annotation upstream_gene_variant.
Consequence to Transcript upstream_gene_variant(ENST00000448407)
No. of Studies 2 (Positive: 0; Negative: 2; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 2)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Hattori, E.,2003 T/C T Association analysis: for CNG pedigrees, TDT P-value = 0.8, ...... Association analysis: for CNG pedigrees, TDT P-value = 0.8, Transmission Ratio=0.5 More... No significant association was observed in BD. No significant association was observed in BD. Negative
Maheshwari, M.,2009 T/C TDT: Raw TDT P-value = 1, Adaptive permutation corrected P-v...... TDT: Raw TDT P-value = 1, Adaptive permutation corrected P-value = 0.25 More... No significant allelic association with BP was found No significant allelic association with BP was found Negative

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
DAOA-AS1 DAOA antisense RNA 1 13q33.2 Mapped by Literature SNP
DAOA D-amino acid oxidase activator 13q33.2 21(13/7/1)

SNPs in LD with rs778334 (count: 0) View in gBrowse (chr13:105507319..105507319 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback Acknowledgements
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Last update: March 31, 2016