BDgene

SNP Report

Basic Info
Name rs7748266 dbSNP Ensembl
Location chr6:35624967 - 35624967(1)
Variant Alleles T/C
Ancestral Allele C
Minor Allele T
Minor Allele Frequence 0.169329
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000357266, ENST00000536438, ENST00000539068, ENST00000542713)
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? YES

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Szczepankiewicz A., 2014 C/T P-value=0.866 P-value=0.866 Our main finding is no association with bipolar disorder. Our main finding is no association with bipolar disorder. Negative

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
FKBP5 FK506 binding protein 5 6p21.31 5(1/4/0)

SNPs in LD with rs7748266 (count: 4) View in gBrowse (chr6:35597645..35636868 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 4)


Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 1)
Reference Statistical Result Description Result Category
Szczepankiewicz A., 2014 P-value=0.347 association analysis for single polymorphisms within FKBP5 gene Negative