BDgene

SNP Report

Basic Info
Name rs746187 dbSNP Ensembl
Location chr13:105346321 - 105346321(1)
Variant Alleles A/G
Ancestral Allele A
Minor Allele G
Minor Allele Frequence 0.201877
No. of Studies 2 (Positive: 0; Negative: 2; Trend: 0)
Source Literature
Overlap with SZ? YES
Overlap with MDD? NO

SNP related studies (count: 2)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Detera-Wadleigh, S. D., 2006 C/T Fisher P-value = 0.5966 for all Fisher P-value = 0.5966 for all Negative
Prata, D., 2008 data not shown data not shown Analysis of each SNP individually showed no significant asso...... Analysis of each SNP individually showed no significant association. More... Negative

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
DAOA D-amino acid oxidase activator 13q33.2 21(13/7/1)

SNPs in LD with rs746187 (count: 2) View in gBrowse (chr13:105346321..105353597 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 2)


Overlap with SZ from cross-disorder studies (count: 1)
Reference Statistical Result Description Result Category
Detera-Wadleigh, S. D., 2006 Fisher P-value = 0.5966 for all, P-value = 0.5966 for SCZ Only Negative

Overlap with MDD from cross-disorder studies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback Acknowledgements
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Last update: March 31, 2016