BDgene

SNP Report

Basic Info
Name rs73935540 dbSNP Ensembl
Location chr2:75115055 - 75115055(1)
Variant Alleles A/C/G
Ancestral Allele A
Minor Allele C
Minor Allele Frequence 0.0423323
Functional Annotation downstream_gene_variant; intron_variant.
Consequence to Transcript downstream_gene_variant(ENST00000497764); intron_variant(ENST00000305249, ENST00000409848)
No. of Studies 1 (Positive: 1; Negative: 0; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Sharp S.I., 2014 A/C P-value=0.04, OR=-1 P-value=0.04, OR=-1 Significant association was observed. Significant association was observed. Positive

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
TACR1 tachykinin receptor 1 2p13.1-p12 3(3/0/0)

SNPs in LD with rs73935540 (count: 0) View in gBrowse (chr2:75115055..75115055 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)