SNP Report

Basic Info

Name	rs7326068 dbSNP Ensembl
Location	chr13:20635373 - 20635373(1)
Variant Alleles	G/A
Ancestral Allele	G
Minor Allele	A
Minor Allele Frequence	0.375399
Functional Annotation	downstream_gene_variant; intron_variant; non_coding_transcript_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000461115); intron_variant(ENST00000319980, ENST00000351808, ENST00000482172, ENST00000537103); non_coding_transcript_variant(ENST00000482172)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	YES
Overlap with MDD?	YES

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Huang, J.,2010	A/G		Omnibus GWAS Test: P-value > 5E-05 Omnibus GWAS Test: P-value > 5E-05	No significant association was observed in BD. No significant association was observed in BD.	Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
IFT88	intraflagellar transport 88	13q12.1	1(0/1/0)

SNPs in LD with rs7326068 (count: 0) View in gBrowse (chr13:20635373..20635373 )

Overlap with SZ from cross-disorder studies (count: 1)

Reference	Statistical Result	Description	Result Category
Huang, J.,2010	Omnibus GWAS Test:P-value > 5E-05	No significant association was observed.	Negative

Overlap with MDD from cross-disorder studies (count: 1)

Reference	Statistical Result	Description	Result Category
Huang, J.,2010	Omnibus GWAS Test:P-value = 0.00000292, best-fit model is Depressive disorders	Suggestive association was found.	Trend