BDgene

SNP Report

Basic Info
Name rs7248493 dbSNP Ensembl
Location chr19:58199741 - 58199741(1)
Variant Alleles C/G
Ancestral Allele C
Minor Allele G
Minor Allele Frequence 0.14357
Functional Annotation intron_variant; non_coding_transcript_variant.
Consequence to Transcript intron_variant(ENST00000326804, ENST00000345813, ENST00000424679, ENST00000594839, ENST00000601995, ENST00000610905, ENST00000615675, ENST00000617501, ENST00000619307, ENST00000621145); non_coding_transcript_variant(ENST00000601995, ENST00000615675, ENST00000619307, ENST00000621145)
No. of Studies 1 (Positive: 0; Negative: 0; Trend: 1)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Jiang, Y.,2011 Non-weighted test under H0: P-value(additive)=0.0000308, P-v...... Non-weighted test under H0: P-value(additive)=0.0000308, P-value(dominant)=0.000043, P-value(recessive)=0.0424; weighted test under H'0: P-value(additive)=0.000014, P-value(dominant)=0.0000246, P-value(recessive)=0.0108; logistic regression: P-value(additive)=0.00000604, P-value(dominant)=0.0000231, P-value(recessive)=0.00678 More... Suggestive association was found. Suggestive association was found. Trend

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
ZNF274 zinc finger protein 274 19q13.43 2(1/1/0)

SNPs in LD with rs7248493 (count: 0) View in gBrowse (chr19:58199741..58199741 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)