SNP Report

Basic Info

Name	rs715519 dbSNP Ensembl
Location	chr22:50599940 - 50599940(1)
Variant Alleles	G/C
Ancestral Allele	G
Minor Allele	C
Minor Allele Frequence	0.211062
Functional Annotation	downstream_gene_variant; intron_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000609758); intron_variant(ENST00000463053); non_coding_transcript_variant(ENST00000463053); upstream_gene_variant(ENST00000008876, ENST00000329492)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	YES
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Severinsen, J. E., 2006 (b)	C/G		P-value = 0.4675 in BD, P-value = 0.7976 in BD and SZ P-value = 0.4675 in BD, P-value = 0.7976 in BD and SZ		Negative

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
MAPK8IP2	mitogen-activated protein kinase 8 interacting protein 2	22q13.33	1(0/1/0)
CHKB	choline kinase beta	22q13.33	Mapped by Literature SNP

SNPs in LD with rs715519 (count: 0) View in gBrowse (chr22:50599940..50599940 )

Overlap with SZ from cross-disorder studies (count: 1)

Reference	Statistical Result	Description	Result Category
Severinsen, J. E., 2006 (b)	P-value = 0.7254 in SZ, P-value = 0.7976 in BD and SZ		Negative

Overlap with MDD from cross-disorder studies (count: 0)