||chr12:89347934 - 89347934(1)
|Minor Allele Frequence
||3_prime_UTR_variant; downstream_gene_variant; upstream_gene_variant.
|Consequence to Transcript
||3_prime_UTR_variant(ENST00000279488); downstream_gene_variant(ENST00000308385, ENST00000547140, ENST00000547291, ENST00000548755); upstream_gene_variant(ENST00000611513)
|No. of Studies
||1 (Positive: 1; Negative: 0; Trend: 0)
|Overlap with SZ?
|Overlap with MDD?
SNP related studies (count: 1)
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.
SNP related genes (count: 1)
Literature-origin SNPs (count: 0)
LD-proxies (count: 26)
Overlap with SZ from cross-disorder studies (count: 1)
|Kim, S. H., 2012 (a)
||chi-square P-value = 0.5978, Permutation P-value = 0.9424, X2=0.2783, OR=1.294; chi-square P-value = 0.6115, Permutation P-value = 0.9859, X2=0.2579, OR=1.475 for female subjects, chi-square P-value = 0.8272, Permutation P-value = 0.9993, X2=0.0476, OR=1.149 for male subjects
||showed nominally significant allelic associations with BD, but not with SPR, in female patients
Overlap with MDD from cross-disorder studies (count: 0)