BDgene

SNP Report

Basic Info
Name rs6741692 dbSNP Ensembl
Location chr2:115546355 - 115546355(1)
Variant Alleles C/G
Ancestral Allele C
Minor Allele G
Minor Allele Frequence 0.464657
Functional Annotation intron_variant; NMD_transcript_variant; non_coding_transcript_variant.
Consequence to Transcript intron_variant(ENST00000310323, ENST00000393146, ENST00000393147, ENST00000409163, ENST00000410059, ENST00000429914, ENST00000461250, ENST00000488208); NMD_transcript_variant(ENST00000429914); non_coding_transcript_variant(ENST00000461250, ENST00000488208)
No. of Studies 1 (Positive: 0; Negative: 0; Trend: 1)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Jiang, Y.,2011 Non-weighted test under H0: P-value(additive)=0.00000465, P-...... Non-weighted test under H0: P-value(additive)=0.00000465, P-value(dominant)=0.0000401, P-value(recessive)=0.00136; weighted test under H'0: P-value(additive)=0.0000748, P-value(dominant)=0.000139, P-value(recessive)=0.00456; logistic regression: P-value(additive)=0.00000585, P-value(dominant)=0.00005, P-value(recessive)=0.00147 More... Suggestive association was found. Suggestive association was found. Trend

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
DPP10 dipeptidyl-peptidase 10 (non-functional) 2q14.1 3(2/1/0)

SNPs in LD with rs6741692 (count: 0) View in gBrowse (chr2:115546355..115546355 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)