SNP Report

Basic Info

Name	rs6557226 dbSNP Ensembl
Location	chr6:152466549 - 152466549(1)
Variant Alleles	G/A
Ancestral Allele	G
Minor Allele	G
Minor Allele Frequence	0.397364
Functional Annotation	intron_variant; NMD_transcript_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	intron_variant(ENST00000341594, ENST00000367248, ENST00000367253, ENST00000367255, ENST00000413186, ENST00000423061, ENST00000461872, ENST00000466159, ENST00000468937, ENST00000474655, ENST00000481502, ENST00000495090, ENST00000535896, ENST00000537750); NMD_transcript_variant(ENST00000474655); non_coding_transcript_variant(ENST00000461872, ENST00000468937, ENST00000481502, ENST00000535896); upstream_gene_variant(ENST00000498751)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
SYNE1	spectrin repeat containing, nuclear envelope 1	6q25.2	6(3/2/1)

SNPs in LD with rs6557226 (count: 0) View in gBrowse (chr6:152466549..152466549 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)