BDgene

SNP Report

Basic Info
Name rs6518948 dbSNP Ensembl
Location chr22:35287062 - 35287062(1)
Variant Alleles G/T
Ancestral Allele T
Minor Allele T
Minor Allele Frequence 0.473642
Functional Annotation intron_variant; NMD_transcript_variant; non_coding_transcript_exon_variant; non_coding_transcript_variant.
Consequence to Transcript intron_variant(ENST00000216106, ENST00000418170); NMD_transcript_variant(ENST00000418170); non_coding_transcript_exon_variant(ENST00000498212); non_coding_transcript_variant(ENST00000498212)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
HMGXB4 HMG box domain containing 4 22q13 1(1/0/0)

SNPs in LD with rs6518948 (count: 0) View in gBrowse (chr22:35287062..35287062 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)