SNP Report

Basic Info

Name	rs6414498 dbSNP Ensembl
Location	chr3:183153426 - 183153426(1)
Variant Alleles	T/G
Ancestral Allele	T
Minor Allele	T
Minor Allele Frequence	0.101837
Functional Annotation	downstream_gene_variant; intron_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000470251, ENST00000476015, ENST00000486686); intron_variant(ENST00000265598, ENST00000466939)
No. of Studies	1 (Positive: 0; Negative: 0; Trend: 1)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Jiang, Y.,2011			Non-weighted test under H0: P-value(additive)=0.00000473, P-...... Non-weighted test under H0: P-value(additive)=0.00000473, P-value(dominant)=0.000000895, P-value(recessive)=0.876; weighted test under H'0: P-value(additive)=0.0000536, P-value(dominant)=0.00000485, P-value(recessive)=0.725; logistic regression: P-value(additive)=0.00000538, P-value(dominant)=0.00000117, P-value(recessive)=0.794 More...	Suggestive association was found. Suggestive association was found.	Trend

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
LAMP3	lysosomal-associated membrane protein 3	3q26.3-q27	1(1/0/0)

SNPs in LD with rs6414498 (count: 0) View in gBrowse (chr3:183153426..183153426 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)