SNP Report

Basic Info

Name	rs62237227 dbSNP Ensembl
Location	chr3:6859384 - 6859384(1)
Variant Alleles	T/C
Ancestral Allele	T
Minor Allele	C
Minor Allele Frequence	0.0545128
Functional Annotation	intron_variant; NMD_transcript_variant; upstream_gene_variant.
Consequence to Transcript	intron_variant(ENST00000443259, ENST00000448328); NMD_transcript_variant(ENST00000443259); upstream_gene_variant(ENST00000357716, ENST00000389335, ENST00000389336, ENST00000435689, ENST00000440923, ENST00000467425, ENST00000486284)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Kandaswamy R., 2014	C/T		MAF=0.19 MAF=0.19	No significant association was observed. No significant association was observed.	Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
GRM7	glutamate receptor, metabotropic 7	3p26-p25	3(2/1/0)

SNPs in LD with rs62237227 (count: 0) View in gBrowse (chr3:6859384..6859384 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)